Following is a comprehensive list of all imaging tools and pipelines developed or contributed to CAI and their corresponding algorithm description and source code links:

1. volgenmodel:

   Atlas building software tool avaliable as perl script volgenmodel.

2. volgenmodel-nipype:

   Minimum deformation atlas buidling software similar to volgenmodel using nipype and Minc framework; available as python script volgenmodel-nipype.

3. sHRF:

   Supplementary Hemodynamic Response Function modelling based on fMRI. Toolbox is based on spm8 and MATLAB framework sHRF

4. Digital Control Server:

   DCS is a server to control camera remotely via socket communication. Based on C language and works on both Linux and MAC OSX.   Digital Control Server. 

5. Digital Control:

   Digital Remote control application for MAC